PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6GKD

#CDRs = 4; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	46.2	H1	13	H1-13-*	-1	AATGSIRSINNMG	BBBEBBABBABBB
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	44.4	H2	9	H2-9-1	8	IITRVGNTD	BBBAALBBB
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	50.0	H3	17	H3-17-*	-1	HAEITEQSrpfYLTDDY
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	5	RDNAKNTV	BBAAALBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	TASGRAFSWYVMG	BBBEBLAAABBBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	CDRLenMismatch	-1.0	H2	10	H2-10-2	12	TVSGNGSRRD	BBBAALABBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	50.0	H3	16	H3-16-*	-1	AASSTYYYTdpEKYDY
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	6	RDNAKNTV	BBAAALBB
G	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	46.2	H1	13	H1-13-*	-1	AATGSIRSINNMG	BBBEBBABBABBB
G	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	44.4	H2	9	H2-9-1	7	IITRVGNTD	BBBAALBBB
G	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	50.0	H3	17	H3-17-*	-1	HAEITEQSrpfYLTDDY
G	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	5	RDNAKNTV	BBAAALBB
H	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	TASGRAFSWYVMG	BBBEBLAAABBBB
H	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	CDRLenMismatch	-1.0	H2	10	H2-10-2	6	TVSGNGSRRD	BBBAALABBB
H	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	50.0	H3	16	H3-16-*	-1	AASSTYYYTdpEKYDY
H	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	7	RDNAKNTV	BBAAALBB
J	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	46.2	H1	13	H1-13-*	-1	AATGSIRSINNMG	BBBEBBABBABBB
J	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	44.4	H2	9	H2-9-1	8	IITRVGNTD	BBBAALBBB
J	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	50.0	H3	17	H3-17-*	-1	HAEITEQSrpfYLTDDY
J	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	5	RDNAKNTV	BBAAALBB
K	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	TASGRAFSWYVMG	BBBEBLAAABBBB
K	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	CDRLenMismatch	-1.0	H2	10	H2-10-2	11	TVSGNGSRRD	BBBAALABBB
K	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	50.0	H3	16	H3-16-*	-1	AASSTYYYTdpEKYDY
K	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	6	RDNAKNTV	BBAAALBB
M	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	46.2	H1	13	H1-13-*	-1	AATGSIRSINNMG	BBBEBBABBBLBB
M	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	44.4	H2	9	H2-9-1	9	IITRVGNTD	BBBAALBBB
M	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	50.0	H3	17	H3-17-*	-1	HAEITEQSrpfYLTDDY
M	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	5	RDNAKNTV	BBAAALBB
N	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	TASGRAFSWYVMG	BBBEBLAAABBBB
N	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	CDRLenMismatch	-1.0	H2	10	H2-10-2	11	TVSGNGSRRD	BBBAALABBB
N	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	50.0	H3	16	H3-16-*	-1	AASSTYYYTdpEKYDY
N	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	6	RDNAKNTV	BBAAALBB
P	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	46.2	H1	13	H1-13-*	-1	AATGSIRSINNMG	BBBEBBABBABBB
P	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	44.4	H2	9	H2-9-1	8	IITRVGNTD	BBBAALBBB
P	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	50.0	H3	17	H3-17-*	-1	HAEITEQSrpfYLTDDY
P	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	5	RDNAKNTV	BBAAALBB
Q	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	TASGRAFSWYVMG	BBBEBLAAABBBB
Q	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	CDRLenMismatch	-1.0	H2	10	H2-10-2	11	TVSGNGSRRD	BBBAALABBB
Q	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	50.0	H3	16	H3-16-*	-1	AASSTYYYTdpEKYDY
Q	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	6	RDNAKNTV	BBAAALBB
S	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	46.2	H1	13	H1-13-*	-1	AATGSIRSINNMG	BBBEBBABBABBB
S	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	44.4	H2	9	H2-9-1	8	IITRVGNTD	BBBAALBBB
S	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	50.0	H3	17	H3-17-*	-1	HAEITEQSrpfYLTDDY
S	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	5	RDNAKNTV	BBAAALBB
T	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	TASGRAFSWYVMG	BBBEBLAAABBBB
T	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	CDRLenMismatch	-1.0	H2	10	H2-10-2	10	TVSGNGSRRD	BBBAALABBB
T	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	50.0	H3	16	H3-16-*	-1	AASSTYYYTdpEKYDY
T	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	6	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022