PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6GJU

#CDRs = 4; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	94.5	La_IGHV1S3*01_VHH	69.2	H1	13	H1-13-5	17	AASGSTFAIIAMG	BBBEBAAABABBB
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	94.5	CDRLenMismatch	-1.0	H2	8	H2-8-*	-1	VISTGDTR
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	94.5	La_IGHV1S3*01_VHH	100.0	H3	12	H3-12-*	-1	NAAVQVRDYRNY	BBBBBBLBBBBB
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	94.5	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	9	RDNAKNTV	BBAAALBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	61.5	H1	13	H1-13-*	-1	AASGSIFRIDAMG	BBBEABABBABBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	66.7	H2	9	H2-9-1	19	HSTSGGSTD	BBBAALBBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	100.0	H3	14	H3-14-*	-1	NADVRTRWYASNNY	BBBBBABAABBBBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	7	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022