PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6GC2

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Mo_IGHV1-9*01	89.0	Mo_IGHV1-9*01	84.6	H1	13	H1-13-1	10	KATGYTFSTYWIE	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Mo_IGHV1-9*01	89.0	Mo_IGHV1-9*01	90.0	H2	10	H2-10-1	14	EILPGSGSTY	BBBAAALBBB
H	heavy	Homo.sapiens	Mo_IGHV1-9*01	89.0	Mo_IGHV1-9*01	100.0	H3	9	H3-9-*	-1	ARGDGYYKY	BBBAEBBAB
H	heavy	Homo.sapiens	Mo_IGHV1-9*01	89.0	Mo_IGHV1-9*01	100.0	H4	8	H4-8-1	7	ADTSSNTA	BBAAALBB
L	kappa	Homo.sapiens	Mo_IGKV5-43*01	97.1	Mo_IGKV5-43*01	100.0	L1	11	L1-11-1	9	RASQSISNNLH	BBABBAEABBB
L	kappa	Homo.sapiens	Mo_IGKV5-43*01	97.1	Mo_IGKV5-43*01	75.0	L2	8	L2-8-1	15	KYVSQSVS	BLLABBBB
L	kappa	Homo.sapiens	Mo_IGKV5-43*01	97.1	Mo_IGKV5-43*01	85.7	L3	9	L3-9-cis7-1	11	GQSNSWPRT	BBAABBbBB
L	kappa	Homo.sapiens	Mo_IGKV5-43*01	97.1	Mo_IGKV5-43*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022