PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6FY3

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	69.2	H1	13	H1-13-1	12	KGFGYSFSTYWIA	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	80.0	H2	10	H2-10-1	10	MIYPGDSDTK	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	100.0	H3	19	H3-19-*	-1	ARLLNNYDssgflYWYLDL
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	87.5	H4	8	H4-8-1	9	GDKSISTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	92.3	L1	13	L1-13-2	6	TRSSGSIASDYVQ	BBABEBAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L2	8	L2-8-1	9	YEDNQRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	71.4	L3	11	L3-11-1	20	QSYDMTNHNWV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L4	8	L4-8-1	5	idSSSNSA	BBAAALBB
X	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	69.2	H1	13	H1-13-1	11	KGFGYSFSTYWIA	BBBLBBAAABBBB
X	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	80.0	H2	10	H2-10-1	11	MIYPGDSDTK	BBBAAALBBB
X	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	100.0	H3	19	H3-19-*	-1	ARLLNNYDssgflYWYLDL
X	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	87.5	H4	8	H4-8-1	9	GDKSISTA	BBAAALBB
Y	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	92.3	L1	13	L1-13-2	6	TRSSGSIASDYVQ	BBABEBAAABBBB
Y	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L2	8	L2-8-1	9	YEDNQRPS	BLEABBBB
Y	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	71.4	L3	11	L3-11-1	20	QSYDMTNHNWV	BBBBAAALBBB
Y	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L4	8	L4-8-1	5	idSSSNSA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022