PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6FY1

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	91.8	Hu_IGHV5-51*01	76.9	H1	13	H1-13-1	11	KGSGYRFPSSWIG	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	91.8	Hu_IGHV5-51*01	80.0	H2	10	H2-10-1	7	IIYPGDGETR	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	91.8	Hu_IGHV5-51*01	100.0	H3	16	H3-16-*	-1	ARHGRGvrEVINAFDI
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	91.8	Hu_IGHV5-51*01	62.5	H4	8	H4-8-1	12	ADQSSNTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*03	89.6	Hu_IGLV3-21*03	63.6	L1	11	L1-11-3	15	GGVDIGSTLVH	BBBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*03	89.6	Hu_IGLV3-21*03	100.0	L2	8	L2-8-1	16	YDDSDRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*03	89.6	Hu_IGLV3-21*03	55.6	L3	10	L3-10-3	18	QVWHSTSAVI	BBBBAAAEBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*03	89.6	Hu_IGLV3-21*03	83.3	L4	6	L4-6-*	-1	NSGNMA	BBAABB
Y	heavy	Homo.sapiens	Hu_IGHV5-51*01	91.8	Hu_IGHV5-51*01	76.9	H1	13	H1-13-1	12	KGSGYRFPSSWIG	BBBLBBAAABBBB
Y	heavy	Homo.sapiens	Hu_IGHV5-51*01	91.8	Hu_IGHV5-51*01	80.0	H2	10	H2-10-1	9	IIYPGDGETR	BBBAAALBBB
Y	heavy	Homo.sapiens	Hu_IGHV5-51*01	91.8	Hu_IGHV5-51*01	100.0	H3	16	H3-16-*	-1	ARHGRGvrEVINAFDI
Y	heavy	Homo.sapiens	Hu_IGHV5-51*01	91.8	Hu_IGHV5-51*01	62.5	H4	8	H4-8-1	9	ADQSSNTA	BBAAALBB
Z	lambda	Homo.sapiens	Hu_IGLV3-21*03	89.6	Hu_IGLV3-21*03	63.6	L1	11	L1-11-3	9	GGVDIGSTLVH	BBBLAAABBBB
Z	lambda	Homo.sapiens	Hu_IGLV3-21*03	89.6	Hu_IGLV3-21*03	100.0	L2	8	L2-8-1	18	YDDSDRPS	BLEABBBB
Z	lambda	Homo.sapiens	Hu_IGLV3-21*03	89.6	Hu_IGLV3-21*03	55.6	L3	10	L3-10-3	14	QVWHSTSAVI	BBBBAAAEBB
Z	lambda	Homo.sapiens	Hu_IGLV3-21*03	89.6	Hu_IGLV3-21*03	83.3	L4	6	L4-6-2	13	NSGNMA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022