PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6FLC

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV12-46*01	94.2	Mo_IGKV12-46*01	72.7	L1	11	L1-11-1	4	RATKNIYNNLA	BBABBAEABBB
A	kappa	Mus.musculus	Mo_IGKV12-46*01	94.2	Mo_IGKV12-46*01	100.0	L2	8	L2-8-1	6	YAATNLAD	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV12-46*01	94.2	Mo_IGKV12-46*01	85.7	L3	9	L3-9-cis7-*	-1	QHFWHTPWT	BBABBBbBB
A	kappa	Mus.musculus	Mo_IGKV12-46*01	94.2	Mo_IGKV12-46*01	83.3	L4	6	L4-6-1	12	GSGTQF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV7-3*04	100.0	Mo_IGHV7-3*04	92.3	H1	13	H1-13-1	10	AASGFTFTDYYMT	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV7-3*04	100.0	Mo_IGHV7-3*04	91.7	H2	12	H2-12-1	6	LIRNKasGYTTE	BBBBAAALLBBB
B	heavy	Mus.musculus	Mo_IGHV7-3*04	100.0	Mo_IGHV7-3*04	33.3	H3	12	H3-12-*	-1	TRAKWDGHYFDY	BBBABLLBEBAB
B	heavy	Mus.musculus	Mo_IGHV7-3*04	100.0	Mo_IGHV7-3*04	100.0	H4	8	H4-8-1	9	RDNSQSIL	BBAAALBB
H	heavy	Mus.musculus	Mo_IGHV7-3*04	100.0	Mo_IGHV7-3*04	92.3	H1	13	H1-13-1	10	AASGFTFTDYYMT	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV7-3*04	100.0	Mo_IGHV7-3*04	91.7	H2	12	H2-12-1	6	LIRNKasGYTTE	BBBBAAALLBBB
H	heavy	Mus.musculus	Mo_IGHV7-3*04	100.0	Mo_IGHV7-3*04	33.3	H3	12	H3-12-*	-1	TRAKWDGHYFDY	BBBABLLBEBAB
H	heavy	Mus.musculus	Mo_IGHV7-3*04	100.0	Mo_IGHV7-3*04	100.0	H4	8	H4-8-1	9	RDNSQSIL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV12-46*01	94.2	Mo_IGKV12-46*01	72.7	L1	11	L1-11-1	4	RATKNIYNNLA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV12-46*01	94.2	Mo_IGKV12-46*01	100.0	L2	8	L2-8-1	6	YAATNLAD	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV12-46*01	94.2	Mo_IGKV12-46*01	85.7	L3	9	L3-9-cis7-*	-1	QHFWHTPWT	BBABBBbBB
L	kappa	Mus.musculus	Mo_IGKV12-46*01	94.2	Mo_IGKV12-46*01	83.3	L4	6	L4-6-1	11	GSGTQF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022