PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6EYN

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	93.3	L1	15	L1-15-*	-1	KASQSVDydgdTYMN
A	kappa	Homo.sapiens	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	87.5	L2	8	L2-8-1	9	YAASNLDS	BLLABBBB
A	kappa	Homo.sapiens	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	85.7	L3	9	L3-9-cis7-1	6	QQTNEDPWT	BBAABBbBB
A	kappa	Homo.sapiens	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Mo_IGHV1-7*01	89.0	Mo_IGHV1-7*01	84.6	H1	13	H1-13-*	-1	KASgytFNGYWMH
B	heavy	Homo.sapiens	Mo_IGHV1-7*01	89.0	Mo_IGHV1-7*01	60.0	H2	10	H2-10-1	6	YINPTTGHTE	BBBAAALBBB
B	heavy	Homo.sapiens	Mo_IGHV1-7*01	89.0	Mo_IGHV1-7*01	100.0	H3	12	H3-12-3	18	ARQEYRHSWFAY	BBBBBLBABBAB
B	heavy	Homo.sapiens	Mo_IGHV1-7*01	89.0	Mo_IGHV1-7*01	75.0	H4	8	H4-8-1	10	ADESSNTA	BBAAALBB
C	kappa	Homo.sapiens	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	93.3	L1	15	L1-15-1	8	KASQSVDydgdTYMN	BBABBABBLLBBBBB
C	kappa	Homo.sapiens	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	87.5	L2	8	L2-8-1	6	YAASNLDS	BLLABBBB
C	kappa	Homo.sapiens	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	85.7	L3	9	L3-9-cis7-1	5	QQTNEDPWT	BBAABBbBB
C	kappa	Homo.sapiens	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Mo_IGHV1-7*01	89.0	Mo_IGHV1-7*01	84.6	H1	13	H1-13-*	-1	KASGYTFNGYWMH	BBBLBBBBBBBBB
D	heavy	Homo.sapiens	Mo_IGHV1-7*01	89.0	Mo_IGHV1-7*01	60.0	H2	10	H2-10-1	5	YINPTTGHTE	BBBAAALBBB
D	heavy	Homo.sapiens	Mo_IGHV1-7*01	89.0	Mo_IGHV1-7*01	100.0	H3	12	H3-12-3	16	ARQEYRHSWFAY	BBBBBLBABBAB
D	heavy	Homo.sapiens	Mo_IGHV1-7*01	89.0	Mo_IGHV1-7*01	75.0	H4	8	H4-8-1	11	ADESSNTA	BBAAALBB
H	heavy	Homo.sapiens	Mo_IGHV1-7*01	89.0	Mo_IGHV1-7*01	84.6	H1	13	H1-13-*	-1	KASgytFNGYWMH
H	heavy	Homo.sapiens	Mo_IGHV1-7*01	89.0	Mo_IGHV1-7*01	60.0	H2	10	H2-10-1	6	YINPTTGHTE	BBBAAALBBB
H	heavy	Homo.sapiens	Mo_IGHV1-7*01	89.0	Mo_IGHV1-7*01	100.0	H3	12	H3-12-3	16	ARQEYRHSWFAY	BBBBBLBABBAB
H	heavy	Homo.sapiens	Mo_IGHV1-7*01	89.0	Mo_IGHV1-7*01	75.0	H4	8	H4-8-1	8	ADESSNTA	BBAAALBB
L	kappa	Homo.sapiens	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	93.3	L1	15	L1-15-1	7	KASQSVDydgdTYMN	BBABBABBLLBBBBB
L	kappa	Homo.sapiens	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	87.5	L2	8	L2-8-1	8	YAASNLDS	BLLABBBB
L	kappa	Homo.sapiens	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	85.7	L3	9	L3-9-cis7-1	6	QQTNEDPWT	BBAABBbBB
L	kappa	Homo.sapiens	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022