PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6EK2

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-4*02	91.8	Mo_IGHV5-4*02	92.3	H1	13	H1-13-1	10	AASGFTFSDYYMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-4*02	91.8	Mo_IGHV5-4*02	100.0	H2	10	H2-10-2	11	TISDGGSYTY	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-4*02	91.8	Mo_IGHV5-4*02	100.0	H3	13	H3-13-*	-1	ARDGNKYSAWFAY	BBBABABBBBBAB
H	heavy	Mus.musculus	Mo_IGHV5-4*02	91.8	Mo_IGHV5-4*02	87.5	H4	8	H4-8-1	7	RDNAKNKL	BBAAALBB
H	kappa	Mus.musculus	Mo_IGKV13-84*01	98.6	Mo_IGKV13-84*01	100.0	L1	11	L1-11-2	7	KASEDIYNRLA	BBABBALLBBB
H	kappa	Mus.musculus	Mo_IGKV13-84*01	98.6	Mo_IGKV13-84*01	100.0	L2	8	L2-8-1	13	SGATSLET	BLLABBBB
H	kappa	Mus.musculus	Mo_IGKV13-84*01	98.6	Mo_IGKV13-84*01	85.7	L3	9	L3-9-cis7-1	16	QQYWSPPWT	BBAABBbBB
H	kappa	Mus.musculus	Mo_IGKV13-84*01	98.6	Mo_IGKV13-84*01	100.0	L4	6	L4-6-1	8	GSGKDY	EBEABB
I	heavy	Mus.musculus	Mo_IGHV5-4*02	91.8	Mo_IGHV5-4*02	92.3	H1	13	H1-13-1	9	AASGFTFSDYYMH	BBBLBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV5-4*02	91.8	Mo_IGHV5-4*02	100.0	H2	10	H2-10-2	14	TISDGGSYTY	BBBAALABBB
I	heavy	Mus.musculus	Mo_IGHV5-4*02	91.8	Mo_IGHV5-4*02	100.0	H3	13	H3-13-*	-1	ARDGNKYSAWFAY	BBBABABBBBBAB
I	heavy	Mus.musculus	Mo_IGHV5-4*02	91.8	Mo_IGHV5-4*02	87.5	H4	8	H4-8-1	7	RDNAKNKL	BBAAALBB
I	kappa	Mus.musculus	Mo_IGKV13-84*01	98.6	Mo_IGKV13-84*01	100.0	L1	11	L1-11-2	6	KASEDIYNRLA	BBABBALLBBB
I	kappa	Mus.musculus	Mo_IGKV13-84*01	98.6	Mo_IGKV13-84*01	100.0	L2	8	L2-8-1	13	SGATSLET	BLLABBBB
I	kappa	Mus.musculus	Mo_IGKV13-84*01	98.6	Mo_IGKV13-84*01	85.7	L3	9	L3-9-cis7-1	16	QQYWSPPWT	BBAABBbBB
I	kappa	Mus.musculus	Mo_IGKV13-84*01	98.6	Mo_IGKV13-84*01	100.0	L4	6	L4-6-1	8	GSGKDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022