PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6EA5

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	93.2	Hu_IGHV3-23*04	100.0	H1	13	H1-13-1	20	AASGFTFSSYAMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	93.2	Hu_IGHV3-23*04	90.0	H2	10	H2-10-2	11	AISGLGGSTY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	93.2	Hu_IGHV3-23*04	100.0	H3	15	H3-15-*	-1	AKDHRVWaAGYHFDY
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	93.2	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	9	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	100.0	L1	11	L1-11-1	18	RASQSISSWLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	87.5	L2	8	L2-8-1	18	SDASSLES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	57.1	L3	8	L3-8-*	-1	QQYYSSPT	BBAABLBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	100.0	L4	6	L4-6-1	19	GSGTEF	EBEABB
M	heavy	Homo.sapiens	Hu_IGHV3-23*04	93.2	Hu_IGHV3-23*04	100.0	H1	13	H1-13-1	19	AASGFTFSSYAMS	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV3-23*04	93.2	Hu_IGHV3-23*04	90.0	H2	10	H2-10-2	11	AISGLGGSTY	BBBAALABBB
M	heavy	Homo.sapiens	Hu_IGHV3-23*04	93.2	Hu_IGHV3-23*04	100.0	H3	15	H3-15-*	-1	AKDHRVWaAGYHFDY
M	heavy	Homo.sapiens	Hu_IGHV3-23*04	93.2	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	9	RDNSKNTL	BBAAALBB
N	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	100.0	L1	11	L1-11-1	19	RASQSISSWLA	BBABBAEABBB
N	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	87.5	L2	8	L2-8-1	18	SDASSLES	BLLABBBB
N	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	57.1	L3	8	L3-8-3	14	QQYYSSPT	BBAABBBB
N	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	100.0	L4	6	L4-6-1	18	GSGTEF	EBEABB
Q	heavy	Homo.sapiens	Hu_IGHV3-23*04	93.2	Hu_IGHV3-23*04	100.0	H1	13	H1-13-1	19	AASGFTFSSYAMS	BBBLBBAAABBBB
Q	heavy	Homo.sapiens	Hu_IGHV3-23*04	93.2	Hu_IGHV3-23*04	90.0	H2	10	H2-10-2	11	AISGLGGSTY	BBBAALABBB
Q	heavy	Homo.sapiens	Hu_IGHV3-23*04	93.2	Hu_IGHV3-23*04	100.0	H3	15	H3-15-*	-1	AKDHRVWaAGYHFDY
Q	heavy	Homo.sapiens	Hu_IGHV3-23*04	93.2	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	9	RDNSKNTL	BBAAALBB
R	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	100.0	L1	11	L1-11-1	20	RASQSISSWLA	BBABBAEABBB
R	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	87.5	L2	8	L2-8-1	18	SDASSLES	BLLABBBB
R	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	57.1	L3	8	L3-8-*	-1	QQYYSSPT	BBAAABBB
R	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	100.0	L4	6	L4-6-1	18	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022