PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6E8V

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	100.0	H1	13	H1-13-1	19	TASGFSLSDKAVG	BBBLBBAAABBBB
A	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	88.9	H2	9	H2-9-1	12	SIDTGGSTG	BBBAALBBB
A	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	100.0	H3	63	H3-63-*	-1	TTVHQYTHKRcpdgytygywcgygtgscvgsncvyypsrgcyggyggcssfsagssyelYVDA
A	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	87.5	H4	8	H4-8-1	10	KDNSESQV	BBAAALBB
B	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L1	13	L1-13-*	-1	SGSSSNVGNGYVS	BBBAAAAAALBBB
B	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L2	8	L2-8-1	12	YGDTSRAS	BLEABBBB
B	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBBBLBAABBB
B	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L4	6	L4-6-2	17	RSGNTA	BBEABB
E	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	100.0	H1	13	H1-13-1	21	TASGFSLSDKAVG	BBBLBBAAABBBB
E	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	88.9	H2	9	H2-9-1	9	SIDTGGSTG	BBBAALBBB
E	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	100.0	H3	63	H3-63-*	-1	TTVHQYTHKRcpdgytygywcgygtgscvgsncvyypsrgcyggyggcssfsagssyelYVDA
E	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	87.5	H4	8	H4-8-1	5	KDNSESQV	BBAAALBB
F	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L1	13	L1-13-*	-1	SGSSSNVGNGYVS	BBBAAAAAALBBB
F	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L2	8	L2-8-1	14	YGDTSRAS	BLLABBBB
F	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBBBLBAABBB
F	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L4	6	L4-6-2	18	RSGNTA	BBEABB
H	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	100.0	H1	13	H1-13-1	20	TASGFSLSDKAVG	BBBLBBAAABBBB
H	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	88.9	H2	9	H2-9-1	13	SIDTGGSTG	BBBAALBBB
H	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	100.0	H3	63	H3-63-*	-1	TTVHQYTHKRcpdgytygywcgygtgscvgsncvyypsrgcyggyggcssfsagssyelYVDA
H	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	87.5	H4	8	H4-8-1	9	KDNSESQV	BBAAALBB
J	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	100.0	H1	13	H1-13-1	17	TASGFSLSDKAVG	BBBLBBAAABBBB
J	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	88.9	H2	9	H2-9-1	12	SIDTGGSTG	BBBAALBBB
J	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	100.0	H3	63	H3-63-*	-1	TTVHQYTHKRcpdgytygywcgygtgscvgsncvyypsrgcyggyggcssfsagssyelYVDA
J	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	87.5	H4	8	H4-8-1	10	KDNSESQV	BBAAALBB
K	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L1	13	L1-13-*	-1	SGSSSNVGNGYVS	BBBAAAAAAELBB
K	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L2	8	L2-8-1	12	YGDTSRAS	BLEABBBB
K	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBBBLBAABBB
K	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L4	6	L4-6-2	19	RSGNTA	BBEABB
L	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L1	13	L1-13-*	-1	SGSSSNVGNGYVS	BBBAAAAAAELBB
L	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L2	8	L2-8-1	15	YGDTSRAS	BLLABBBB
L	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBBBLBAABBB
L	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L4	6	L4-6-2	23	RSGNTA	BBEABB
O	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	100.0	H1	13	H1-13-1	18	TASGFSLSDKAVG	BBBLBBAAABBBB
O	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	88.9	H2	9	H2-9-1	10	SIDTGGSTG	BBBAALBBB
O	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	100.0	H3	63	H3-63-*	-1	TTVHQYTHKRcpdgytygywcgygtgscvgsncvyypsrgcyggyggcssfsagssyelYVDA
O	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	87.5	H4	8	H4-8-1	8	KDNSESQV	BBAAALBB
P	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L1	13	L1-13-*	-1	SGSSSNVGNGYVS	BBBAAAAAALBBB
P	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L2	8	L2-8-1	13	YGDTSRAS	BLEABBBB
P	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBBBLBAABBB
P	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L4	6	L4-6-2	18	RSGNTA	BBEABB
U	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	100.0	H1	13	H1-13-1	22	TASGFSLSDKAVG	BBBLBBAAABBBB
U	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	88.9	H2	9	H2-9-1	8	SIDTGGSTG	BBBAALBBB
U	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	100.0	H3	63	H3-63-*	-1	TTVHQYTHKRcpdgytygywcgygtgscvgsncvyypsrgcyggyggcssfsagssyelYVDA
U	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	87.5	H4	8	H4-8-1	15	KDNSESQV	BBAAALBB
V	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L1	13	L1-13-*	-1	SGSSSNVGNGYVS	BBBAAAAAAELBB
V	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L2	8	L2-8-1	14	YGDTSRAS	BLLABBBB
V	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBBBLBAABBB
V	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L4	6	L4-6-2	23	RSGNTA	BBEABB
Y	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	100.0	H1	13	H1-13-1	18	TASGFSLSDKAVG	BBBLBBAAABBBB
Y	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	88.9	H2	9	H2-9-1	9	SIDTGGSTG	BBBAALBBB
Y	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	100.0	H3	63	H3-63-*	-1	TTVHQYTHKRcpdgytygywcgygtgscvgsncvyypsrgcyggyggcssfsagssyelYVDA
Y	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	87.5	H4	8	H4-8-1	9	KDNSESQV	BBAAALBB
Z	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L1	13	L1-13-*	-1	SGSSSNVGNGYVS	BBBAAAAAALBBB
Z	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L2	8	L2-8-1	14	YGDTSRAS	BLEABBBB
Z	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBBBLBAABBB
Z	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L4	6	L4-6-2	17	RSGNTA	BBEABB
c	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	100.0	H1	13	H1-13-1	21	TASGFSLSDKAVG	BBBLBBAAABBBB
c	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	88.9	H2	9	H2-9-1	10	SIDTGGSTG	BBBAALBBB
c	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	100.0	H3	63	H3-63-*	-1	TTVHQYTHKRcpdgytygywcgygtgscvgsncvyypsrgcyggyggcssfsagssyelYVDA
c	heavy	Bos.taurus	Bo_IGHV1-7*02	98.6	Bo_IGHV1-7*02	87.5	H4	8	H4-8-1	11	KDNSESQV	BBAAALBB
d	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L1	13	L1-13-*	-1	SGSSSNVGNGYVS	BBBAAAAAALBBB
d	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L2	8	L2-8-1	14	YGDTSRAS	BLEABBBB
d	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBBBLBAABBB
d	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L4	6	L4-6-2	14	RSGNTA	BBEABB

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