PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6E1K

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	72.7	L1	11	L1-11-*	-1	RAsqSVSSAVA
C	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	75.0	L2	8	L2-8-*	-1	YSASSLYS	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	28.6	L3	9	L3-9-*	-1	QQSSSSLIT	BBBAAABBB
C	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	83.3	L4	6	L4-6-2	23	RSGTDF	BBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-74*01	91.8	Hu_IGHV3-74*01	61.5	H1	13	H1-13-*	-1	AASGFNVYSYSIH	BBAALABLAABBB
D	heavy	Homo.sapiens	Hu_IGHV3-74*01	91.8	Hu_IGHV3-74*01	60.0	H2	10	H2-10-1	29	SISSYYSSTS	BBBAAALBBB
D	heavy	Homo.sapiens	Hu_IGHV3-74*01	91.8	Hu_IGHV3-74*01	100.0	H3	17	H3-17-*	-1	ARSYWYWRTStlgGIDY
D	heavy	Homo.sapiens	Hu_IGHV3-74*01	91.8	Hu_IGHV3-74*01	50.0	H4	8	H4-8-1	14	ADTSKNTA	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	72.7	L1	11	L1-11-*	-1	RAsqSVSSAVA
E	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	75.0	L2	8	L2-8-*	-1	YSASSLYS	BLLABBBB
E	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	28.6	L3	9	L3-9-*	-1	QQSSSSLIT	BBBAAABBB
E	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	83.3	L4	6	L4-6-2	23	RSGTDF	BBEABB
F	heavy	Homo.sapiens	Hu_IGHV3-74*01	91.8	Hu_IGHV3-74*01	61.5	H1	13	H1-13-*	-1	AASGFNVYSYSIH	BBAALABLAABBB
F	heavy	Homo.sapiens	Hu_IGHV3-74*01	91.8	Hu_IGHV3-74*01	60.0	H2	10	H2-10-1	29	SISSYYSSTS	BBBAAALBBB
F	heavy	Homo.sapiens	Hu_IGHV3-74*01	91.8	Hu_IGHV3-74*01	100.0	H3	17	H3-17-*	-1	ARSYWYWRTStlgGIDY
F	heavy	Homo.sapiens	Hu_IGHV3-74*01	91.8	Hu_IGHV3-74*01	50.0	H4	8	H4-8-1	15	ADTSKNTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022