PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6DZM

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.4	Hu_IGHV3-23*04	100.0	H1	13	H1-13-1	23	AASGFTFSSYAMS	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.4	Hu_IGHV3-23*04	90.0	H2	10	H2-10-2	22	AISGLGGSTY	BBBAALABBB
G	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.4	Hu_IGHV3-23*04	100.0	H3	15	H3-15-*	-1	AKDHRVWaAGYHFDY
G	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.4	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	12	RDNSKNTL	BBAAALBB
H	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	100.0	L1	11	L1-11-*	-1	RASQSISSWLA	BBABBBBLABB
H	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	87.5	L2	8	L2-8-1	27	SDASSLES	BLLABBBB
H	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	57.1	L3	8	L3-8-*	-1	QQYYSSPT	BBAAABBB
H	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	100.0	L4	6	L4-6-1	18	GSGTEF	EBEABB
I	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.4	Hu_IGHV3-23*04	100.0	H1	13	H1-13-1	23	AASGFTFSSYAMS	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.4	Hu_IGHV3-23*04	90.0	H2	10	H2-10-2	22	AISGLGGSTY	BBBAALABBB
I	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.4	Hu_IGHV3-23*04	100.0	H3	15	H3-15-*	-1	AKDHRVWaAGYHFDY
I	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.4	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	12	RDNSKNTL	BBAAALBB
J	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.4	Hu_IGHV3-23*04	100.0	H1	13	H1-13-1	23	AASGFTFSSYAMS	BBBLBBAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.4	Hu_IGHV3-23*04	90.0	H2	10	H2-10-2	22	AISGLGGSTY	BBBAALABBB
J	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.4	Hu_IGHV3-23*04	100.0	H3	15	H3-15-*	-1	AKDHRVWaAGYHFDY
J	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.4	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	12	RDNSKNTL	BBAAALBB
K	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	100.0	L1	11	L1-11-*	-1	RASQSISSWLA	BBABBBBLABB
K	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	87.5	L2	8	L2-8-1	27	SDASSLES	BLLABBBB
K	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	57.1	L3	8	L3-8-*	-1	QQYYSSPT	BBAAABBB
K	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	100.0	L4	6	L4-6-1	18	GSGTEF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	100.0	L1	11	L1-11-*	-1	RASQSISSWLA	BBABBBBLABB
L	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	87.5	L2	8	L2-8-1	27	SDASSLES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	57.1	L3	8	L3-8-*	-1	QQYYSSPT	BBAAABBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	100.0	L4	6	L4-6-1	18	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022