PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6DSI

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	53.8	H1	13	H1-13-*	-1	AASGFRFYAEDMG	BBBLBABBLBBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	60.0	H2	10	H2-10-*	-1	SIYGPSGSTY	BBBEAALBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H3	12	H3-12-1	18	AKRGYGSGAFDY	BBBBAAALBBAB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	10	RDNSKNTL	BBAAALBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L1	11	L1-11-1	9	RASQSISSYLN	BBABBAEABBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	7	YGASNLQS	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	42.9	L3	9	L3-9-cis7-1	15	QQDSYLPYT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022