PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6DO1

#CDRs = 4; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	46.2	H1	13	H1-13-*	-1	AASGNIFDVDIMG	BBBEBABBBABBB
C	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	66.7	H2	9	H2-9-1	17	SITDGGSTD	BBBAALBBB
C	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	50.0	H3	20	H3-20-*	-1	AAVAYPDIPTYFDydsdnfY
C	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	12	RDNAKNTV	BBAAALBB
D	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	46.2	H1	13	H1-13-*	-1	AASGNIFDVDIMG	BBBEBABBBABBB
D	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	66.7	H2	9	H2-9-1	17	SITDGGSTD	BBBAALBBB
D	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	50.0	H3	20	H3-20-*	-1	AAVAYPDIPTYFDydsdnfY
D	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	11	RDNAKNTV	BBAAALBB
E	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	46.2	H1	13	H1-13-*	-1	AASGnifdVDIMG
E	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	66.7	H2	9	H2-9-*	-1	SITdggstd
E	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	50.0	H3	20	H3-20-*	-1	AAVaypdiptyfdydsdnfY
E	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-*	-1	rdnaKNTV
F	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	46.2	H1	13	H1-13-*	-1	AASgnifdvDIMG
F	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	66.7	H2	9	H2-9-1	16	SITDGGSTD	BBBAALBBB
F	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	50.0	H3	20	H3-20-*	-1	AAVaypdiptyfdydsdnfy
F	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	19	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022