PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6DG2

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1S81*02	90.4	Mo_IGHV1S81*02	100.0	H1	13	H1-13-1	7	KASGYTFTSYWMH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1S81*02	90.4	Mo_IGHV1S81*02	80.0	H2	10	H2-10-1	9	EINPRNGRTD	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV1S81*02	90.4	Mo_IGHV1S81*02	100.0	H3	11	H3-11-*	-1	ARWGYYGSSDY	BBBBAAEEBAB
A	heavy	Mus.musculus	Mo_IGHV1S81*02	90.4	Mo_IGHV1S81*02	87.5	H4	8	H4-8-1	5	VDTSSSTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	5	KASQDVSVAVA	BBABBAEABBB
B	kappa	Mus.musculus	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	87.5	L2	8	L2-8-1	4	YSASYRIT	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	100.0	L3	10	L3-10-*	-1	QQHYSTpPWT	BBBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
C	heavy	Mus.musculus	Mo_IGHV1S81*02	90.4	Mo_IGHV1S81*02	100.0	H1	13	H1-13-1	6	KASGYTFTSYWMH	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV1S81*02	90.4	Mo_IGHV1S81*02	80.0	H2	10	H2-10-1	10	EINPRNGRTD	BBBAAALBBB
C	heavy	Mus.musculus	Mo_IGHV1S81*02	90.4	Mo_IGHV1S81*02	100.0	H3	11	H3-11-*	-1	ARWGYYGSSDY	BBBBAAEEBAB
C	heavy	Mus.musculus	Mo_IGHV1S81*02	90.4	Mo_IGHV1S81*02	87.5	H4	8	H4-8-1	5	VDTSSSTA	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	90.9	L1	11	L1-11-*	-1	KASQDVSVAVA	BBABBBAABBB
D	kappa	Mus.musculus	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	87.5	L2	8	L2-8-*	-1	YSASYRIT	ABLABBBB
D	kappa	Mus.musculus	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	100.0	L3	10	L3-10-*	-1	QQHYSTpPWT	BBAAABABBB
D	kappa	Mus.musculus	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022