PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6DFH

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Homo.sapiens	Hu_IGHV4-4*02	100.0	Hu_IGHV4-4*02	100.0	H1	14	H1-14-*	-1	AVSGGSISsSNWWS	BBBLBABAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV4-4*02	100.0	Hu_IGHV4-4*02	100.0	H2	9	H2-9-1	12	EIYHSGSTN	BBBAALBBB
G	heavy	Homo.sapiens	Hu_IGHV4-4*02	100.0	Hu_IGHV4-4*02	100.0	H3	23	H3-23-*	-1	ARNAitifgvviiGEYYYYGMDV
G	heavy	Homo.sapiens	Hu_IGHV4-4*02	100.0	Hu_IGHV4-4*02	100.0	H4	8	H4-8-1	12	VDKSKNQF	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV4-4*02	100.0	Hu_IGHV4-4*02	100.0	H1	14	H1-14-*	-1	AVSGGSISsSNWWS	BBBLBABAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-4*02	100.0	Hu_IGHV4-4*02	100.0	H2	9	H2-9-1	12	EIYHSGSTN	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-4*02	100.0	Hu_IGHV4-4*02	100.0	H3	23	H3-23-*	-1	ARNAitifgvviiGEYYYYGMDV
H	heavy	Homo.sapiens	Hu_IGHV4-4*02	100.0	Hu_IGHV4-4*02	100.0	H4	8	H4-8-1	12	VDKSKNQF	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV4-4*02	100.0	Hu_IGHV4-4*02	100.0	H1	14	H1-14-*	-1	AVSGGSISsSNWWS	BBBLBABAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV4-4*02	100.0	Hu_IGHV4-4*02	100.0	H2	9	H2-9-1	12	EIYHSGSTN	BBBAALBBB
I	heavy	Homo.sapiens	Hu_IGHV4-4*02	100.0	Hu_IGHV4-4*02	100.0	H3	23	H3-23-*	-1	ARNAitifgvviiGEYYYYGMDV
I	heavy	Homo.sapiens	Hu_IGHV4-4*02	100.0	Hu_IGHV4-4*02	100.0	H4	8	H4-8-1	12	VDKSKNQF	BBAAALBB
J	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	100.0	L1	11	L1-11-4	10	SGDALPKQYAY	BEAAAAABBBB
J	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	100.0	L2	8	L2-8-1	16	YKDSERPS	BLLABBBB
J	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	100.0	L3	11	L3-11-2	15	QSADSSGTYWV	BBBBAALABBB
J	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	100.0	L4	6	L4-6-2	14	SSGTTV	BBEABB
K	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	100.0	L1	11	L1-11-4	10	SGDALPKQYAY	BEAAAAABBBB
K	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	100.0	L2	8	L2-8-1	16	YKDSERPS	BLLABBBB
K	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	100.0	L3	11	L3-11-2	15	QSADSSGTYWV	BBBBAALABBB
K	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	100.0	L4	6	L4-6-2	14	SSGTTV	BBEABB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	100.0	L1	11	L1-11-4	10	SGDALPKQYAY	BEAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	100.0	L2	8	L2-8-1	16	YKDSERPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	100.0	L3	11	L3-11-2	15	QSADSSGTYWV	BBBBAALABBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	100.0	L4	6	L4-6-2	14	SSGTTV	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022