PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6DDV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	87.5	L1	16	L1-16-1	13	RSSQHIvhsneNTYLE	BBABBABBAALBBBBB
A	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	8	YKVSNRFS	BLEABBBB
A	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	10	FQGSHVPWT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV1-84*02	78.9	Mo_IGHV1-84*02	61.5	H1	13	H1-13-1	16	KTSGFTFSDNYIS	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV1-84*02	78.9	Mo_IGHV1-84*02	50.0	H2	10	H2-10-1	9	WIYAGTGGSS	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV1-84*02	78.9	Mo_IGHV1-84*02	100.0	H3	15	H3-15-*	-1	ARHDYYGtSGAWFAY
B	heavy	Mus.musculus	Mo_IGHV1-84*02	78.9	Mo_IGHV1-84*02	87.5	H4	8	H4-8-1	10	VDTSSRTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022