PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6DCV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV4-1*01	87.0	Hu_IGKV4-1*01	76.5	L1	17	L1-17-1	7	KSSQSVfsrdnnKNYLA	BBABBABBAAALBBBBB
A	kappa	Homo.sapiens	Hu_IGKV4-1*01	87.0	Hu_IGKV4-1*01	75.0	L2	8	L2-8-1	7	FWASSRES	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV4-1*01	87.0	Hu_IGKV4-1*01	57.1	L3	9	L3-9-cis7-1	20	QHYFNTPHN	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV4-1*01	87.0	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV5-51*02	76.7	Hu_IGHV5-51*02	61.5	H1	13	H1-13-1	8	KTSGYIFSDYWTA	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV5-51*02	76.7	Hu_IGHV5-51*02	90.0	H2	10	H2-10-1	15	IIYSGDSDTR	BBBAAALBBB
B	heavy	Homo.sapiens	Hu_IGHV5-51*02	76.7	Hu_IGHV5-51*02	100.0	H3	15	H3-15-*	-1	ARLDArVDAGWQLDS
B	heavy	Homo.sapiens	Hu_IGHV5-51*02	76.7	Hu_IGHV5-51*02	50.0	H4	8	H4-8-1	7	TDSSLTTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*02	76.7	Hu_IGHV5-51*02	61.5	H1	13	H1-13-1	9	KTSGYIFSDYWTA	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*02	76.7	Hu_IGHV5-51*02	90.0	H2	10	H2-10-1	16	IIYSGDSDTR	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*02	76.7	Hu_IGHV5-51*02	100.0	H3	15	H3-15-*	-1	ARLDArVDAGWQLDS
H	heavy	Homo.sapiens	Hu_IGHV5-51*02	76.7	Hu_IGHV5-51*02	50.0	H4	8	H4-8-1	5	TDSSLTTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	87.0	Hu_IGKV4-1*01	76.5	L1	17	L1-17-1	8	KSSQSVfsrdnnKNYLA	BBABBABBAAALBBBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	87.0	Hu_IGKV4-1*01	75.0	L2	8	L2-8-1	7	FWASSRES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	87.0	Hu_IGKV4-1*01	57.1	L3	9	L3-9-cis7-1	22	QHYFNTPHN	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	87.0	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022