PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6DCQ

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-30*10	83.3	Hu_IGHV3-30*10	46.2	H1	13	H1-13-*	-1	VVSDFPFSKYPMY	BBBBBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*10	83.3	Hu_IGHV3-30*10	30.0	H2	10	H2-10-*	-1	AISGDAWHVV	LBBABABLBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*10	83.3	Hu_IGHV3-30*10	100.0	H3	28	H3-28-*	-1	ARmfqesgpprldrwsGRNYYYYSGMDV
H	heavy	Homo.sapiens	Hu_IGHV3-30*10	83.3	Hu_IGHV3-30*10	87.5	H4	8	H4-8-1	14	RDNVKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*02	91.3	Hu_IGKV2D-29*02	68.8	L1	16	L1-16-*	-1	KSSESLrqsngKTSLY	BBABBABBAALBBABB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*02	91.3	Hu_IGKV2D-29*02	87.5	L2	8	L2-8-*	-1	FEVSNRFS	ABBLBBBB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*02	91.3	Hu_IGKV2D-29*02	57.1	L3	9	L3-9-cis7-1	17	MQSKDFPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*02	91.3	Hu_IGKV2D-29*02	100.0	L4	6	L4-6-1	26	GSGTDF	EBEABB
M	heavy	Homo.sapiens	Hu_IGHV3-30*10	83.3	Hu_IGHV3-30*10	46.2	H1	13	H1-13-*	-1	VVSDFPFSKYPMY	BBBLBALAABBBB
M	heavy	Homo.sapiens	Hu_IGHV3-30*10	83.3	Hu_IGHV3-30*10	30.0	H2	10	H2-10-2	20	AISGDAWHVV	BBBAALABBB
M	heavy	Homo.sapiens	Hu_IGHV3-30*10	83.3	Hu_IGHV3-30*10	100.0	H3	28	H3-28-*	-1	ARmfqesgpprldrwsGRNYYYYSGMDV
M	heavy	Homo.sapiens	Hu_IGHV3-30*10	83.3	Hu_IGHV3-30*10	87.5	H4	8	H4-8-1	11	RDNVKNTL	BBAAALBB
N	kappa	Homo.sapiens	Hu_IGKV2D-29*02	91.3	Hu_IGKV2D-29*02	68.8	L1	16	L1-16-1	21	KSSESLrqsngKTSLY	BBABBABBAALBBABB
N	kappa	Homo.sapiens	Hu_IGKV2D-29*02	91.3	Hu_IGKV2D-29*02	87.5	L2	8	L2-8-*	-1	FEVSNRFS	ABAABBBB
N	kappa	Homo.sapiens	Hu_IGKV2D-29*02	91.3	Hu_IGKV2D-29*02	57.1	L3	9	L3-9-cis7-1	15	MQSKDFPLT	BBAABBbBB
N	kappa	Homo.sapiens	Hu_IGKV2D-29*02	91.3	Hu_IGKV2D-29*02	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022