PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6DC7

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	92.3	H1	13	H1-13-1	6	KASGYTFTSYVIH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	90.0	H2	10	H2-10-1	9	YIYPYNDGTI	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	50.0	H3	10	H3-10-*	-1	VRERDNYGVY	BBBBBAAEBB
H	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	75.0	H4	8	H4-8-1	4	SDTSSSTV	BBAAALBB
I	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	92.3	H1	13	H1-13-1	12	KASGYTFTSYVIH	BBBLBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	90.0	H2	10	H2-10-1	11	YIYPYNDGTI	BBBAAALBBB
I	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	50.0	H3	10	H3-10-*	-1	VRERDNYGVY	BBBBBAAEBB
I	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	75.0	H4	8	H4-8-1	5	SDTSSSTV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L1	16	L1-16-1	10	RSSQSIvhsngNTYLE	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	87.5	L2	8	L2-8-1	7	YKVSNRFY	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	71.4	L3	9	L3-9-cis7-1	7	FQDSHIPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
M	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L1	16	L1-16-1	10	RSSQSIvhsngNTYLE	BBABBABBAALBBBBB
M	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	87.5	L2	8	L2-8-1	6	YKVSNRFY	BLLABBBB
M	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	71.4	L3	9	L3-9-cis7-1	7	FQDSHIPYT	BBAABBbBB
M	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022