PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6DB9

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Synthetic.construct	Hu_IGHV3-66*01	94.5	Ra_IGHV5-19*01	53.8	H1	13	H1-13-1	9	AASGFYISYSSIH	BBBLBBAAABBBB
H	heavy	Synthetic.construct	Hu_IGHV3-66*01	94.5	Ra_IGHV5-19*01	80.0	H2	10	H2-10-3	9	SISPYSGSTY	BBBBLALBBB
H	heavy	Synthetic.construct	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	100.0	H3	15	H3-15-*	-1	ARQGYRRrSGRGFDY
H	heavy	Synthetic.construct	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	8	ADTSKNTA	BBAAALBB
L	kappa	Synthetic.construct	Hu_IGKV1-39*01	98.6	Ra_IGKV3S6*01	54.5	L1	11	L1-11-2	8	RASQSVSSAVA	BBABBALLBBB
L	kappa	Synthetic.construct	Hu_IGKV1-39*01	98.6	Ra_IGKV3S6*01	75.0	L2	8	L2-8-1	6	YSASSLYS	BLLABBBB
L	kappa	Synthetic.construct	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	7	QQSYSFPST	BBAABBbBB
L	kappa	Synthetic.construct	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	11	RSGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022