PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6D9W

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV2-6*02	98.6	Mo_IGHV2-6*02	100.0	H1	13	H1-13-1	14	TVSGFSLTSYGVH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV2-6*02	98.6	Mo_IGHV2-6*02	100.0	H2	9	H2-9-*	-1	VIWSDGSTT	BBBBLLBBB
H	heavy	Mus.musculus	Mo_IGHV2-6*02	98.6	Mo_IGHV2-6*02	100.0	H3	8	H3-8-*	-1	AREPPYGY	BBBABLAB
H	heavy	Mus.musculus	Mo_IGHV2-6*02	98.6	Mo_IGHV2-6*02	100.0	H4	8	H4-8-1	9	KDNSKSQV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L1	11	L1-11-*	-1	RASQSISNNLH	BBABBBBLBBB
L	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	75.0	L2	8	L2-8-*	-1	KYVSQSSS	BABLBBBB
L	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L3	9	L3-9-cis7-1	12	QQSNSWPRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L4	6	L4-6-*	-1	GSGTDF	BBBLBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022