PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6D0U

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	86.3	CDRLenMismatch	-1.0	H1	18	H1-18-*	-1	VGSGSSFgestlSYYAVS
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	86.3	Hu_IGHV3-23*04	30.0	H2	10	H2-10-*	-1	IINAGGGDID	BBBAALBLBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	86.3	Hu_IGHV3-23*04	100.0	H3	26	H3-26-*	-1	AKHMSMQQVpsagweredlvgDAFDV
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	86.3	Hu_IGHV3-23*04	87.5	H4	8	H4-8-1	7	RDNSKETL	BBAAALBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*04	86.3	CDRLenMismatch	-1.0	H1	18	H1-18-*	-1	VGSGSSFgestlSYYAVS
E	heavy	Homo.sapiens	Hu_IGHV3-23*04	86.3	Hu_IGHV3-23*04	30.0	H2	10	H2-10-*	-1	IINAGGGDID	BBBAALBLBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*04	86.3	Hu_IGHV3-23*04	100.0	H3	26	H3-26-*	-1	AKHMSMQQVpsagweredlvgDAFDV
E	heavy	Homo.sapiens	Hu_IGHV3-23*04	86.3	Hu_IGHV3-23*04	87.5	H4	8	H4-8-1	5	RDNSKETL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	86.3	CDRLenMismatch	-1.0	H1	18	H1-18-*	-1	VGSGSSFgestlSYYAVS
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	86.3	Hu_IGHV3-23*04	30.0	H2	10	H2-10-*	-1	IINAGGGDID	BBBAALBLBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	86.3	Hu_IGHV3-23*04	100.0	H3	26	H3-26-*	-1	AKHMSMQQVpsagweredlvgDAFDV
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	86.3	Hu_IGHV3-23*04	87.5	H4	8	H4-8-1	8	RDNSKETL	BBAAALBB
K	heavy	Homo.sapiens	Hu_IGHV3-23*04	86.3	CDRLenMismatch	-1.0	H1	18	H1-18-*	-1	VGSGSSFgestlSYYAVS
K	heavy	Homo.sapiens	Hu_IGHV3-23*04	86.3	Hu_IGHV3-23*04	30.0	H2	10	H2-10-*	-1	IINAGGGDID	BBBAALBLBB
K	heavy	Homo.sapiens	Hu_IGHV3-23*04	86.3	Hu_IGHV3-23*04	100.0	H3	26	H3-26-*	-1	AKHMSMQQVpsagweredlvgDAFDV
K	heavy	Homo.sapiens	Hu_IGHV3-23*04	86.3	Hu_IGHV3-23*04	87.5	H4	8	H4-8-1	7	RDNSKETL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022