PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6D01

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	92.3	H1	13	H1-13-1	10	AASGFTFSNYGMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	90.0	H2	10	H2-10-2	8	VIWYDGSKKY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H3	16	H3-16-*	-1	ARVRDSsdYYGDAFDI
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	10	RDNSKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L1	11	L1-11-1	6	RASQSISSWLA	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	87.5	L2	8	L2-8-1	9	YKASNLES	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	71.4	L3	8	L3-8-1	11	QQYNNYWT	BBAABEBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	9	GSGTEF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	92.3	H1	13	H1-13-1	10	AASGFTFSNYGMH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	90.0	H2	10	H2-10-2	8	VIWYDGSKKY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H3	16	H3-16-*	-1	ARVRDSsdYYGDAFDI
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	11	RDNSKNTL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L1	11	L1-11-1	6	RASQSISSWLA	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	87.5	L2	8	L2-8-1	9	YKASNLES	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	71.4	L3	8	L3-8-1	10	QQYNNYWT	BBAABEBB
D	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	9	GSGTEF	EBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	92.3	H1	13	H1-13-1	11	AASGFTFSNYGMH	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	90.0	H2	10	H2-10-2	8	VIWYDGSKKY	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H3	16	H3-16-*	-1	ARVRDSsdYYGDAFDI
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	11	RDNSKNTL	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L1	11	L1-11-1	5	RASQSISSWLA	BBABBAEABBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	87.5	L2	8	L2-8-1	9	YKASNLES	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	71.4	L3	8	L3-8-1	11	QQYNNYWT	BBAABEBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	9	GSGTEF	EBEABB
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	92.3	H1	13	H1-13-1	11	AASGFTFSNYGMH	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	90.0	H2	10	H2-10-2	8	VIWYDGSKKY	BBBAALABBB
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H3	16	H3-16-*	-1	ARVRDSsdYYGDAFDI
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	11	RDNSKNTL	BBAAALBB
H	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L1	11	L1-11-1	6	RASQSISSWLA	BBABBAEABBB
H	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	87.5	L2	8	L2-8-1	9	YKASNLES	BLEABBBB
H	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	71.4	L3	8	L3-8-1	10	QQYNNYWT	BBAABEBB
H	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	9	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022