PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6CT7

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-15*06	89.0	Hu_IGHV3-15*06	69.2	H1	13	H1-13-1	15	AVSGFDFEKAWMS	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-15*06	89.0	Hu_IGHV3-15*06	75.0	H2	12	H2-12-1	12	RIKStaDGGTTS	BBBBAAALLBBB
A	heavy	Homo.sapiens	Hu_IGHV3-15*06	89.0	Hu_IGHV3-15*06	50.0	H3	4	H3-4-*	-1	TSAH
A	heavy	Homo.sapiens	Hu_IGHV3-15*06	89.0	Hu_IGHV3-15*06	75.0	H4	8	H4-8-1	8	RDDSRNML	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV3-25*02	89.6	Hu_IGLV3-25*02	63.6	L1	11	L1-11-4	6	SGEALPMQFAH	BBAAAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-25*02	89.6	Hu_IGLV3-25*02	100.0	L2	8	L2-8-1	11	YKDSERPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-25*02	89.6	Hu_IGLV3-25*02	66.7	L3	11	L3-11-2	14	QSPDSTNTYEV	BBBBAALABBB
B	lambda	Homo.sapiens	Hu_IGLV3-25*02	89.6	Hu_IGLV3-25*02	83.3	L4	6	L4-6-2	12	SSGTTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-15*06	89.0	Hu_IGHV3-15*06	69.2	H1	13	H1-13-1	13	AVSGFDFEKAWMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-15*06	89.0	Hu_IGHV3-15*06	75.0	H2	12	H2-12-1	12	RIKStaDGGTTS	BBBBAAALLBBB
H	heavy	Homo.sapiens	Hu_IGHV3-15*06	89.0	Hu_IGHV3-15*06	50.0	H3	4	H3-4-*	-1	TSAH
H	heavy	Homo.sapiens	Hu_IGHV3-15*06	89.0	Hu_IGHV3-15*06	75.0	H4	8	H4-8-1	5	RDDSRNML	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	89.6	Hu_IGLV3-25*02	63.6	L1	11	L1-11-4	7	SGEALPMQFAH	BBAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	89.6	Hu_IGLV3-25*02	100.0	L2	8	L2-8-1	12	YKDSERPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	89.6	Hu_IGLV3-25*02	66.7	L3	11	L3-11-2	13	QSPDSTNTYEV	BBBBAALABBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	89.6	Hu_IGLV3-25*02	83.3	L4	6	L4-6-2	12	SSGTTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022