PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6CMI

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	75.0	L1	12	L1-12-1	9	RASQSIRsTYLA	BBABBBBAAABB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	12	YGASSRAT	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	85.7	L3	8	L3-8-*	-1	QQYGRSPS	BBBEABBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV1-69*16	97.3	Hu_IGHV1-69*16	69.2	H1	13	H1-13-*	-1	KSSGGTFSNYAIN	BALLEBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*16	97.3	Hu_IGHV1-69*16	90.0	H2	10	H2-10-*	-1	GIIPILGIAN	BBBAABABBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*16	97.3	Hu_IGHV1-69*16	100.0	H3	25	H3-25-*	-1	ARgwgreqlaphpSQYYYYYYGMDV
D	heavy	Homo.sapiens	Hu_IGHV1-69*16	97.3	Hu_IGHV1-69*16	100.0	H4	8	H4-8-1	8	TDESTSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022