PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6CMG

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	75.0	L1	12	L1-12-1	10	RASQSIRsTYLA	BBABBBBAAABB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L2	8	L2-8-*	-1	YGASSRAT	BLLBBBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	85.7	L3	8	L3-8-*	-1	QQYGRSPS	BBBEABBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV1-69*16	97.3	Hu_IGHV1-69*16	69.2	H1	13	H1-13-*	-1	KSSGGTFSNYAIN	BBAABBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*16	97.3	Hu_IGHV1-69*16	90.0	H2	10	H2-10-1	16	GIIPILGIAN	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*16	97.3	Hu_IGHV1-69*16	100.0	H3	25	H3-25-*	-1	ARgwgreqlaphpSQYYYYYYGMDV
C	heavy	Homo.sapiens	Hu_IGHV1-69*16	97.3	Hu_IGHV1-69*16	100.0	H4	8	H4-8-1	13	TDESTSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022