PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6CEZ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S7*01	77.5	Rb_IGHV1S7*01	38.5	H1	13	H1-13-*	-1	KASGIDFNNCGVT	BBBLBBBBLBBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S7*01	77.5	Rb_IGHV1S7*01	50.0	H2	10	H2-10-1	20	YIYTGLGVGH	BBBAAALBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S7*01	77.5	Rb_IGHV1S7*01	100.0	H3	16	H3-16-*	-1	ARDGVMSgvEGYYFNL
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S7*01	77.5	Rb_IGHV1S7*01	62.5	H4	8	H4-8-*	-1	SDNAQNAV	ABABLBBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S40*01	91.0	Rb_IGKV1S40*01	69.2	L1	13	L1-13-*	-1	QASQSVYsdNWLG	BBABBBAEAABBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S40*01	91.0	Rb_IGKV1S40*01	75.0	L2	8	L2-8-1	11	YAASNLAS	BLLABBBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S40*01	91.0	Rb_IGKV1S40*01	0.0	L3	9	L3-9-4	22	AGGFSPNWA	BBBAEABBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S40*01	91.0	Rb_IGKV1S40*01	100.0	L4	6	L4-6-1	9	GSGTQF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022