PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6C6Z

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	92.3	H1	13	H1-13-*	-1	KASGGTFSIYAIS	BBBEEBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H2	10	H2-10-1	15	GIIPIFGTAN	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H3	20	H3-20-*	-1	AREGGHQGYcsggscYDFDY
C	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H4	8	H4-8-1	8	ADKSTSTA	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L1	16	L1-16-1	7	RSSQSLlhsngYNYLD	BBABBABBAALBBBBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L2	8	L2-8-1	6	YLGSNRAS	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L3	8	L3-8-*	-1	MQALQTPA	BBAAABBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	92.3	H1	13	H1-13-*	-1	KASGGTFSIYAIS	BBBEEBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H2	10	H2-10-1	18	GIIPIFGTAN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H3	20	H3-20-*	-1	AREGGHQGYcsggscYDFDY
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H4	8	H4-8-1	9	ADKSTSTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L1	16	L1-16-1	7	RSSQSLlhsngYNYLD	BBABBABBAALBBBBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L2	8	L2-8-1	4	YLGSNRAS	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L3	8	L3-8-*	-1	MQALQTPA	BBABEBBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022