PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6C08

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV9-3-1*01	63.9	Mo_IGHV9-3-1*01	76.9	H1	13	H1-13-1	13	KASGYSFTDYVMN	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV9-3-1*01	63.9	Mo_IGHV9-3-1*01	50.0	H2	10	H2-10-1	15	SINTSNGYTT	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV9-3-1*01	63.9	Mo_IGHV9-3-1*01	100.0	H3	12	H3-12-*	-1	ARNFRGNGAMDY	BBBBBEBEBBAB
A	heavy	Mus.musculus	Mo_IGHV9-3-1*01	63.9	Mo_IGHV9-3-1*01	62.5	H4	8	H4-8-1	14	VDSSASTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV15-103*01	68.7	CDRLenMismatch	-1.0	L1	14	L1-14-*	-1	QASNNITTYssfIF	BBABBABAAAEBBB
B	kappa	Mus.musculus	Mo_IGKV15-103*01	68.7	Mo_IGKV15-103*01	37.5	L2	8	L2-8-1	8	YDSSTLES	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV15-103*01	68.7	Mo_IGKV15-103*01	14.3	L3	9	L3-9-2	14	LQYNGEVRT	BBAABABBB
B	kappa	Mus.musculus	Mo_IGKV15-103*01	68.7	Mo_IGKV15-103*01	66.7	L4	6	L4-6-1	7	GSGRDF	EBEABB
D	heavy	Mus.musculus	Mo_IGHV9-3-1*01	63.9	Mo_IGHV9-3-1*01	76.9	H1	13	H1-13-1	14	KASGYSFTDYVMN	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV9-3-1*01	63.9	Mo_IGHV9-3-1*01	50.0	H2	10	H2-10-1	15	SINTSNGYTT	BBBAAALBBB
D	heavy	Mus.musculus	Mo_IGHV9-3-1*01	63.9	Mo_IGHV9-3-1*01	100.0	H3	12	H3-12-*	-1	ARNFRGNGAMDY	BBBBBEBEBBAB
D	heavy	Mus.musculus	Mo_IGHV9-3-1*01	63.9	Mo_IGHV9-3-1*01	62.5	H4	8	H4-8-1	14	VDSSASTA	BBAAALBB
E	kappa	Mus.musculus	Mo_IGKV15-103*01	68.7	CDRLenMismatch	-1.0	L1	14	L1-14-*	-1	QASNNITTYssfIF	BBABBABAABBBBB
E	kappa	Mus.musculus	Mo_IGKV15-103*01	68.7	Mo_IGKV15-103*01	37.5	L2	8	L2-8-1	8	YDSSTLES	BLLABBBB
E	kappa	Mus.musculus	Mo_IGKV15-103*01	68.7	Mo_IGKV15-103*01	14.3	L3	9	L3-9-2	14	LQYNGEVRT	BBAABABBB
E	kappa	Mus.musculus	Mo_IGKV15-103*01	68.7	Mo_IGKV15-103*01	66.7	L4	6	L4-6-1	7	GSGRDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022