PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6BTJ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	76.9	H1	13	H1-13-*	-1	KASGYTLTRYYFH	BBBAAAAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	80.0	H2	10	H2-10-6	11	IINPNGGGTS	BBBABLLBBB
A	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	100.0	H3	17	H3-17-*	-1	ARDMPYYHDSGgplFDL
A	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	62.5	H4	8	H4-8-1	8	SDMSTSTI	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	72.7	L1	11	L1-11-1	9	RPSQSISTFLN	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	5	YDASSLQS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	8	QQSFSTPYT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	83.3	L4	6	L4-6-1	10	GSGTEF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	76.9	H1	13	H1-13-*	-1	KASGYTLTRYYFH	BBBAAAAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	80.0	H2	10	H2-10-6	11	IINPNGGGTS	BBBABLLBBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	100.0	H3	17	H3-17-*	-1	ARDMPYYHDSGgplFDL
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	62.5	H4	8	H4-8-1	8	SDMSTSTI	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	72.7	L1	11	L1-11-1	9	RPSQSISTFLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	5	YDASSLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	9	QQSFSTPYT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	83.3	L4	6	L4-6-1	10	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022