PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6BPC

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Mus.musculus	Mo_IGHV5-16*01	97.3	Mo_IGHV5-16*01	100.0	H1	13	H1-13-1	8	TASGFTFSDYYMA	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV5-16*01	97.3	Mo_IGHV5-16*01	70.0	H2	10	H2-10-2	15	NINYDGSTPD	BBBAALABBB
B	heavy	Mus.musculus	Mo_IGHV5-16*01	97.3	Mo_IGHV5-16*01	100.0	H3	11	H3-11-1	18	ARETVVGSFDY	BBBBAALBBAB
B	heavy	Mus.musculus	Mo_IGHV5-16*01	97.3	Mo_IGHV5-16*01	100.0	H4	8	H4-8-1	5	RDNAKNIL	BBAAALBB
C	kappa	Mus.musculus	Mo_IGKV6-15*01	95.5	Mo_IGKV6-15*01	100.0	L1	11	L1-11-1	7	KASQNVGTNVA	BBABBAEABBB
C	kappa	Mus.musculus	Mo_IGKV6-15*01	95.5	Mo_IGKV6-15*01	100.0	L2	8	L2-8-1	8	YSASYRYS	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV6-15*01	95.5	Mo_IGKV6-15*01	100.0	L3	9	L3-9-cis7-1	6	QQYNSYPYT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV6-15*01	95.5	Mo_IGKV6-15*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
E	heavy	Mus.musculus	Mo_IGHV5-16*01	97.3	Mo_IGHV5-16*01	100.0	H1	13	H1-13-1	7	TASGFTFSDYYMA	BBBLBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV5-16*01	97.3	Mo_IGHV5-16*01	70.0	H2	10	H2-10-2	11	NINYDGSTPD	BBBAALABBB
E	heavy	Mus.musculus	Mo_IGHV5-16*01	97.3	Mo_IGHV5-16*01	100.0	H3	11	H3-11-1	15	ARETVVGSFDY	BBBBAALBBAB
E	heavy	Mus.musculus	Mo_IGHV5-16*01	97.3	Mo_IGHV5-16*01	100.0	H4	8	H4-8-1	6	RDNAKNIL	BBAAALBB
F	kappa	Mus.musculus	Mo_IGKV6-15*01	95.5	Mo_IGKV6-15*01	100.0	L1	11	L1-11-1	7	KASQNVGTNVA	BBABBAEABBB
F	kappa	Mus.musculus	Mo_IGKV6-15*01	95.5	Mo_IGKV6-15*01	100.0	L2	8	L2-8-*	-1	YSASYRYS	BLLABBBA
F	kappa	Mus.musculus	Mo_IGKV6-15*01	95.5	Mo_IGKV6-15*01	100.0	L3	9	L3-9-cis7-1	10	QQYNSYPYT	BBAABBbBB
F	kappa	Mus.musculus	Mo_IGKV6-15*01	95.5	Mo_IGKV6-15*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022