PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6BKD

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-69*03	90.8	Hu_IGHV1-69*03	69.2	H1	13	H1-13-*	-1	KASGDTFRSYVIT	BBABABAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*03	90.8	Hu_IGHV1-69*03	70.0	H2	10	H2-10-1	16	AIIPFFGTTN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*03	90.8	Hu_IGHV1-69*03	0.0	H3	24	H3-24-*	-1	AKAGDLSvggvlaggvpHLRHFDP
H	heavy	Homo.sapiens	Hu_IGHV1-69*03	90.8	Hu_IGHV1-69*03	75.0	H4	8	H4-8-*	-1	ADESTKTV	BBAABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	58.3	L1	12	L1-12-1	23	RAGQTVAsNSLA	BBABBBBAABBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	75.0	L2	8	L2-8-*	-1	YGASIRAS	BEBLBBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	71.4	L3	8	L3-8-*	-1	QQYGlsST
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	21	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022