PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6BKC

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	88.6	CDRLenMismatch	-1.0	H1	12	H1-12-*	-1	KDSGDTFNEPVT
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	88.6	Hu_IGHV1-69*17	60.0	H2	10	H2-10-1	11	GIIPAFGVTK	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	88.6	Hu_IGHV1-69*17	50.0	H3	21	H3-21-*	-1	AKVGLRGivmvgglAMNWLDP
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	88.6	Hu_IGHV1-69*17	75.0	H4	8	H4-8-*	-1	ADASTATA	BBAABABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L1	12	L1-12-1	17	RASQSVSsSYLA	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	17	YGASSRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L3	9	L3-9-2	11	QQYGSSPQT	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022