PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6BKB

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-69*03	84.6	Hu_IGHV1-69*03	46.2	H1	13	H1-13-*	-1	RPPggNFNSYSIN
H	heavy	Homo.sapiens	Hu_IGHV1-69*03	84.6	Hu_IGHV1-69*03	50.0	H2	10	H2-10-1	14	TFIPMFGTSK	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*03	84.6	Hu_IGHV1-69*03	0.0	H3	20	H3-20-*	-1	VRPETPRYcsggfcYGEFDN
H	heavy	Homo.sapiens	Hu_IGHV1-69*03	84.6	Hu_IGHV1-69*03	62.5	H4	8	H4-8-*	-1	AdgssgTA
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.1	Hu_IGKV3-20*01	91.7	L1	12	L1-12-*	-1	RASQSVSgSYLA	BBABBAEBBBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.1	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	17	YGASNRAT	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.1	Hu_IGKV3-20*01	100.0	L3	8	L3-8-3	8	QQYGSSPT	BBAABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022