PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6BF4

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	61.5	H1	13	H1-13-1	13	AASGFPFNRDWMT	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	50.0	H2	10	H2-10-2	10	NINMDGDKKD	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H3	19	H3-19-*	-1	ARIRQVSKYlqwypGVFEM
B	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	87.5	H4	8	H4-8-1	5	RDNAKTSL	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	76.5	L1	17	L1-17-1	7	KSSQSVlyrpnnRNYVA	BBABBABBAAALBBBBB
C	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	75.0	L2	8	L2-8-1	6	HWASFRES	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	42.9	L3	8	L3-8-1	9	QQYFFLYS	BBAABEBB
C	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	61.5	H1	13	H1-13-1	12	AASGFPFNRDWMT	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	50.0	H2	10	H2-10-2	10	NINMDGDKKD	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H3	19	H3-19-*	-1	ARIRQVSKYlqwypGVFEM
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	87.5	H4	8	H4-8-1	6	RDNAKTSL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	76.5	L1	17	L1-17-1	7	KSSQSVlyrpnnRNYVA	BBABBABBAAALBBBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	75.0	L2	8	L2-8-1	5	HWASFRES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	42.9	L3	8	L3-8-1	9	QQYFFLYS	BBAABEBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022