PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6BCK

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-2*07	74.3	Hu_IGHV1-2*07	46.2	H1	13	H1-13-*	-1	EAQGYRFPDYIIH	BBBLBBAABEBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*07	74.3	Hu_IGHV1-2*07	50.0	H2	10	H2-10-1	13	WMNPMGGQVN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*07	74.3	Hu_IGHV1-2*07	50.0	H3	21	H3-21-*	-1	VRDRSNgsgkrfeSSNWFLDL
H	heavy	Homo.sapiens	Hu_IGHV1-2*07	74.3	Hu_IGHV1-2*07	87.5	H4	8	H4-8-1	17	RDTSIETA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-11*01	79.4	CDRLenMismatch	-1.0	L1	8	L1-8-*	-1	TGTHNLVS	BEBABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-11*01	79.4	Hu_IGLV2-11*01	75.0	L2	8	L2-8-1	26	YDFNKRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-11*01	79.4	Hu_IGLV2-11*01	0.0	L3	5	L3-5-1	12	WAYEA	BBEAB
L	lambda	Homo.sapiens	Hu_IGLV2-11*01	79.4	Hu_IGLV2-11*01	66.7	L4	6	L4-6-*	-1	GSGGTA	EBLLBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022