PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6AZM

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L1	17	L1-17-1	4	KSSQSVlyssnnKNYLA	BBABBABBAAALBBBBB
A	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	6	YWASTRES	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L3	9	L3-9-cis7-1	7	QQYYSTPIT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H1	13	H1-13-1	6	AASGFTFSSYAMS	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H2	10	H2-10-2	7	AISGSGGSTY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H3	18	H3-18-*	-1	AKDPGGDSspagRTWFDP
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	16	RDNSKNTL	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L1	17	L1-17-1	5	KSSQSVlyssnnKNYLA	BBABBABBAAALBBBBB
C	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	6	YWASTRES	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L3	9	L3-9-cis7-1	7	QQYYSTPIT	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H1	13	H1-13-1	7	AASGFTFSSYAMS	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H2	10	H2-10-2	8	AISGSGGSTY	BBBAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H3	18	H3-18-*	-1	AKDPGGDSspagRTWFDP
D	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	17	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022