PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6AXL

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-30*10	91.8	Hu_IGHV3-30*10	84.6	H1	13	H1-13-1	7	TASGFTFSTYAMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-30*10	91.8	Hu_IGHV3-30*10	70.0	H2	10	H2-10-2	9	VISYHSTNKY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-30*10	91.8	Hu_IGHV3-30*10	100.0	H3	12	H3-12-*	-1	ARDGYSSSFFDF	BBBAALALBBAB
A	heavy	Homo.sapiens	Hu_IGHV3-30*10	91.8	Hu_IGHV3-30*10	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	90.9	L1	11	L1-11-1	10	RASQSISRWLA	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	62.5	L2	8	L2-8-1	7	SGASVLES	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	71.4	L3	9	L3-9-2	14	QHYNSYFVT	BBBABABBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	9	GSGTEF	EBEABB
C	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	90.9	L1	11	L1-11-1	7	RASQSISRWLA	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	62.5	L2	8	L2-8-1	9	SGASVLES	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	71.4	L3	9	L3-9-2	14	QHYNSYFVT	BBAABABBB
C	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	10	GSGTEF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-30*10	91.8	Hu_IGHV3-30*10	84.6	H1	13	H1-13-1	7	TASGFTFSTYAMH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-30*10	91.8	Hu_IGHV3-30*10	70.0	H2	10	H2-10-2	9	VISYHSTNKY	BBBAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-30*10	91.8	Hu_IGHV3-30*10	100.0	H3	12	H3-12-*	-1	ARDGYSSSFFDF	BBBAALALBBAB
D	heavy	Homo.sapiens	Hu_IGHV3-30*10	91.8	Hu_IGHV3-30*10	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022