PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6AVN

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-2*07	74.0	Ra_IGHV1-28*01	69.2	H1	13	H1-13-1	9	AASGYTFTDFDIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*07	74.0	Ra_IGHV1-28*01	30.0	H2	10	H2-10-6	10	WVRPLGGGVS	BBBABLLBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*07	74.0	Hu_IGHV1-2*07	100.0	H3	13	H3-13-*	-1	ARMGAAREWDFQY	BBBBAALALBBAB
H	heavy	Homo.sapiens	Hu_IGHV1-2*07	74.0	Hu_IGHV1-2*07	62.5	H4	8	H4-8-1	9	RDFYIDTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-23*03	89.7	Ra_IGLV2S1*01	46.2	L1	13	L1-13-*	-1	TASSDFRGFSSVS	BBBABBAAAABBB
L	lambda	Homo.sapiens	Hu_IGLV2-23*03	89.7	Ra_IGLV2S1*01	37.5	L2	8	L2-8-*	-1	FSVNRRPS	ABEABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-23*03	89.7	Hu_IGLV2-23*03	0.0	L3	5	L3-5-1	11	NAYEF	BBEAB
L	lambda	Homo.sapiens	Hu_IGLV2-23*03	89.7	Hu_IGLV2-23*03	100.0	L4	6	L4-6-2	11	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022