PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6AJ7

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-7*01	91.8	Mo_IGHV1-7*01	92.3	H1	13	H1-13-1	15	KASGYTFTNYWMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-7*01	91.8	Mo_IGHV1-7*01	50.0	H2	10	H2-10-1	14	YVNPNTDYTD	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-7*01	91.8	Mo_IGHV1-7*01	100.0	H3	13	H3-13-*	-1	ARGTFGNYASFAY	BBBBABBBBBBAB
H	heavy	Mus.musculus	Mo_IGHV1-7*01	91.8	Mo_IGHV1-7*01	100.0	H4	8	H4-8-1	15	ADKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV9-123*01	100.0	Mo_IGKV9-123*01	90.9	L1	11	L1-11-*	-1	RASQDIRGNLD	BBABBALELBB
L	kappa	Mus.musculus	Mo_IGKV9-123*01	100.0	Mo_IGKV9-123*01	100.0	L2	8	L2-8-1	19	YSTSNLNS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV9-123*01	100.0	Mo_IGKV9-123*01	100.0	L3	9	L3-9-cis7-1	11	LQRNAYPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV9-123*01	100.0	Mo_IGKV9-123*01	100.0	L4	6	L4-6-*	-1	GSGSDY	BBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022