PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6A9K

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	87.5	L1	16	L1-16-1	15	RSSQSLvhssgNTYLE	BBABBABBAALBBBBB
A	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	87.5	L2	8	L2-8-1	5	YKISNRFS	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	85.7	L3	9	L3-9-cis7-1	12	FQTSHVPPT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV5-9-1*01	93.2	Mo_IGHV5-9-1*01	76.9	H1	13	H1-13-1	11	AASEFTFSTYIMS	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV5-9-1*01	93.2	Mo_IGHV5-9-1*01	80.0	H2	10	H2-10-2	15	TISSSGTYTY	BBBAALABBB
B	heavy	Mus.musculus	Mo_IGHV5-9-1*01	93.2	Mo_IGHV5-9-1*01	100.0	H3	11	H3-11-*	-1	ARRDYYDGFTY	BBBBEAAEBAB
B	heavy	Mus.musculus	Mo_IGHV5-9-1*01	93.2	Mo_IGHV5-9-1*01	75.0	H4	8	H4-8-1	8	RDNANNIL	BBAAALBB
H	heavy	Mus.musculus	Mo_IGHV5-9-1*01	93.2	Mo_IGHV5-9-1*01	76.9	H1	13	H1-13-1	11	AASEFTFSTYIMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-9-1*01	93.2	Mo_IGHV5-9-1*01	80.0	H2	10	H2-10-2	7	TISSSGTYTY	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-9-1*01	93.2	Mo_IGHV5-9-1*01	100.0	H3	11	H3-11-*	-1	ARRDYYDGFTY	BBBBEAAEBAB
H	heavy	Mus.musculus	Mo_IGHV5-9-1*01	93.2	Mo_IGHV5-9-1*01	75.0	H4	8	H4-8-1	6	RDNANNIL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	87.5	L1	16	L1-16-1	9	RSSQSLvhssgNTYLE	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	87.5	L2	8	L2-8-1	5	YKISNRFS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	85.7	L3	9	L3-9-cis7-1	12	FQTSHVPPT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022