PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6A78

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-6-3*01	95.9	Mo_IGHV5-6-3*01	84.6	H1	13	H1-13-1	9	AASGFTFSTYDMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-6-3*01	95.9	Mo_IGHV5-6-3*01	100.0	H2	10	H2-10-2	8	TINSNGGSTY	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-6-3*01	95.9	Mo_IGHV5-6-3*01	100.0	H3	15	H3-15-*	-1	AREALLRpPYYALDY
H	heavy	Mus.musculus	Mo_IGHV5-6-3*01	95.9	Mo_IGHV5-6-3*01	87.5	H4	8	H4-8-1	10	RDNAKNIL	BBAAALBB
I	heavy	Mus.musculus	Mo_IGHV5-6-3*01	95.9	Mo_IGHV5-6-3*01	84.6	H1	13	H1-13-1	9	AASGFTFSTYDMS	BBBLBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV5-6-3*01	95.9	Mo_IGHV5-6-3*01	100.0	H2	10	H2-10-2	7	TINSNGGSTY	BBBAALABBB
I	heavy	Mus.musculus	Mo_IGHV5-6-3*01	95.9	Mo_IGHV5-6-3*01	100.0	H3	15	H3-15-*	-1	AREALLRpPYYALDY
I	heavy	Mus.musculus	Mo_IGHV5-6-3*01	95.9	Mo_IGHV5-6-3*01	87.5	H4	8	H4-8-1	10	RDNAKNIL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV12-89*01	97.1	Mo_IGKV12-89*01	90.9	L1	11	L1-11-2	7	GASENIYGALT	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV12-89*01	97.1	Mo_IGKV12-89*01	87.5	L2	8	L2-8-*	-1	YGAINLAD	BLLABBBA
L	kappa	Mus.musculus	Mo_IGKV12-89*01	97.1	Mo_IGKV12-89*01	100.0	L3	9	L3-9-cis7-1	22	QNVLSTPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV12-89*01	97.1	Mo_IGKV12-89*01	100.0	L4	6	L4-6-1	10	GSGRQY	EBEABB
M	kappa	Mus.musculus	Mo_IGKV12-89*01	97.1	Mo_IGKV12-89*01	90.9	L1	11	L1-11-2	6	GASENIYGALT	BBABBALLBBB
M	kappa	Mus.musculus	Mo_IGKV12-89*01	97.1	Mo_IGKV12-89*01	87.5	L2	8	L2-8-*	-1	YGAINLAD	BLLABBBA
M	kappa	Mus.musculus	Mo_IGKV12-89*01	97.1	Mo_IGKV12-89*01	100.0	L3	9	L3-9-cis7-1	23	QNVLSTPFT	BBAABBbBB
M	kappa	Mus.musculus	Mo_IGKV12-89*01	97.1	Mo_IGKV12-89*01	100.0	L4	6	L4-6-1	10	GSGRQY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022