PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5YUP

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-15*02	93.2	Mo_IGHV5-15*02	100.0	H1	13	H1-13-1	7	AASGFTFSDYGMA	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-15*02	93.2	CDRLenMismatch	-1.0	H2	9	H2-9-*	-1	FISNLSRIY	BBBAAEBBB
H	heavy	Mus.musculus	Mo_IGHV5-15*02	93.2	Mo_IGHV5-15*02	50.0	H3	11	H3-11-*	-1	TRDDGYYRVDY	BBBAABBBBAB
H	heavy	Mus.musculus	Mo_IGHV5-15*02	93.2	Mo_IGHV5-15*02	87.5	H4	8	H4-8-1	9	RENDKNTL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV6-23*01	94.2	CDRLenMismatch	-1.0	L1	12	L1-12-*	-1	KASQDVGIgLVS	BBABBAEAELBB
L	kappa	Mus.musculus	Mo_IGKV6-23*01	94.2	Mo_IGKV6-23*01	87.5	L2	8	L2-8-1	6	HWASTRHT	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV6-23*01	94.2	Mo_IGKV6-23*01	71.4	L3	9	L3-9-cis7-1	7	QQFSNYPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV6-23*01	94.2	Mo_IGKV6-23*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022