PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5YFI

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S135*01	95.9	Mo_IGHV1S135*01	61.5	H1	13	H1-13-*	-1	KASGFPFSTYNIY	BBBLBBBLABBBB
H	heavy	Mus.musculus	Mo_IGHV1S135*01	95.9	Mo_IGHV1S135*01	100.0	H2	10	H2-10-*	-1	YIDPYNGGTS	BBBAAALEBB
H	heavy	Mus.musculus	Mo_IGHV1S135*01	95.9	Mo_IGHV1S135*01	100.0	H3	14	H3-14-*	-1	ARRWYTydGDWFAY
H	heavy	Mus.musculus	Mo_IGHV1S135*01	95.9	Mo_IGHV1S135*01	100.0	H4	8	H4-8-1	15	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV14-111*01	97.1	Mo_IGKV14-111*01	90.9	L1	11	L1-11-2	6	KASQDINRYLS	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV14-111*01	97.1	Mo_IGKV14-111*01	75.0	L2	8	L2-8-1	17	YRANRMLD	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV14-111*01	97.1	Mo_IGKV14-111*01	100.0	L3	9	L3-9-cis7-1	13	LQYDEFPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV14-111*01	97.1	Mo_IGKV14-111*01	100.0	L4	6	L4-6-1	9	GSGQDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022