PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5YE3

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV19-93*01	94.2	Mo_IGKV19-93*01	100.0	L1	11	L1-11-2	5	KASQDINKYIA	BBABBALLBBB
A	kappa	Mus.musculus	Mo_IGKV19-93*01	94.2	Mo_IGKV19-93*01	87.5	L2	8	L2-8-1	5	YYTSTLQP	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV19-93*01	94.2	Mo_IGKV19-93*01	85.7	L3	8	L3-8-1	8	LQYDNLRT	BBAABEBB
A	kappa	Mus.musculus	Mo_IGKV19-93*01	94.2	Mo_IGKV19-93*01	83.3	L4	6	L4-6-1	10	GSGRHY	EBEABB
B	heavy	Mus.musculus	Mo_IGHV9-2-1*01	100.0	Mo_IGHV9-2-1*01	100.0	H1	13	H1-13-1	8	KASGYTFTDYSMH	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV9-2-1*01	100.0	Mo_IGHV9-2-1*01	90.0	H2	10	H2-10-1	13	WINTATGEPT	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV9-2-1*01	100.0	Mo_IGHV9-2-1*01	50.0	H3	4	H3-4-*	-1	GRDY
B	heavy	Mus.musculus	Mo_IGHV9-2-1*01	100.0	Mo_IGHV9-2-1*01	100.0	H4	8	H4-8-1	7	LETSASTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022