PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5Y2M

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
I	heavy	Homo.sapiens	Hu_IGHV3-30*01	93.2	Hu_IGHV3-30*01	76.9	H1	13	H1-13-1	11	EASGFTSSAYAMH	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-30*01	93.2	Hu_IGHV3-30*01	50.0	H2	10	H2-10-2	15	VITFDGGYQY	BBBAALABBB
I	heavy	Homo.sapiens	Hu_IGHV3-30*01	93.2	Hu_IGHV3-30*01	100.0	H3	21	H3-21-*	-1	ARDPLTKllpfdwvSGGYFDY
I	heavy	Homo.sapiens	Hu_IGHV3-30*01	93.2	Hu_IGHV3-30*01	75.0	H4	8	H4-8-1	9	RDISRNTL	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA	BBABBBAALBBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	8	YRASSRAT	BLLABBBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	85.7	L3	8	L3-8-1	8	QQYGSSFT	BBAABEBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
K	heavy	Homo.sapiens	Hu_IGHV3-30*01	93.2	Hu_IGHV3-30*01	76.9	H1	13	H1-13-1	11	EASGFTSSAYAMH	BBBLBBAAABBBB
K	heavy	Homo.sapiens	Hu_IGHV3-30*01	93.2	Hu_IGHV3-30*01	50.0	H2	10	H2-10-2	15	VITFDGGYQY	BBBAALABBB
K	heavy	Homo.sapiens	Hu_IGHV3-30*01	93.2	Hu_IGHV3-30*01	100.0	H3	21	H3-21-*	-1	ARDPLTKllpfdwvSGGYFDY
K	heavy	Homo.sapiens	Hu_IGHV3-30*01	93.2	Hu_IGHV3-30*01	75.0	H4	8	H4-8-1	9	RDISRNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA	BBABBBAALBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	8	YRASSRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	85.7	L3	8	L3-8-1	8	QQYGSSFT	BBAABEBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022