PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5Y0A

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence
D	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	92.3	H1	13	H1-13-*	-1	AASGFTFSKYGMH
D	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	90.0	H2	10	H2-10-*	-1	VISYEGSNKY
D	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H3	23	H3-23-*	-1	AKSGTQYYDttgyeyrglEYFGY
D	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H4	8	H4-8-*	-1	RDNSKNTL
E	kappa	Homo.sapiens	Hu_IGKV3D-20*02	97.1	Hu_IGKV3D-20*02	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA
E	kappa	Homo.sapiens	Hu_IGKV3D-20*02	97.1	Hu_IGKV3D-20*02	100.0	L2	8	L2-8-*	-1	YDASSRAT
E	kappa	Homo.sapiens	Hu_IGKV3D-20*02	97.1	Hu_IGKV3D-20*02	28.6	L3	9	L3-9-*	-1	QQYGRSRWT
E	kappa	Homo.sapiens	Hu_IGKV3D-20*02	97.1	Hu_IGKV3D-20*02	100.0	L4	6	L4-6-*	-1	GSGTDF
F	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	92.3	H1	13	H1-13-*	-1	AASGFTFSKYGMH
F	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	90.0	H2	10	H2-10-*	-1	VISYEGSNKY
F	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H3	23	H3-23-*	-1	AKSGTQYYDttgyeyrglEYFGY
F	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H4	8	H4-8-*	-1	RDNSKNTL
G	kappa	Homo.sapiens	Hu_IGKV3D-20*02	97.1	Hu_IGKV3D-20*02	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA
G	kappa	Homo.sapiens	Hu_IGKV3D-20*02	97.1	Hu_IGKV3D-20*02	100.0	L2	8	L2-8-*	-1	YDASSRAT
G	kappa	Homo.sapiens	Hu_IGKV3D-20*02	97.1	Hu_IGKV3D-20*02	28.6	L3	9	L3-9-*	-1	QQYGRSRWT
G	kappa	Homo.sapiens	Hu_IGKV3D-20*02	97.1	Hu_IGKV3D-20*02	100.0	L4	6	L4-6-*	-1	GSGTDF
H	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	92.3	H1	13	H1-13-*	-1	AASGFTFSKYGMH
H	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	90.0	H2	10	H2-10-*	-1	VISYEGSNKY
H	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H3	23	H3-23-*	-1	AKSGTQYYDttgyeyrglEYFGY
H	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H4	8	H4-8-*	-1	RDNSKNTL
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	97.1	Hu_IGKV3D-20*02	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	97.1	Hu_IGKV3D-20*02	100.0	L2	8	L2-8-*	-1	YDASSRAT
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	97.1	Hu_IGKV3D-20*02	28.6	L3	9	L3-9-*	-1	QQYGRSRWT
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	97.1	Hu_IGKV3D-20*02	100.0	L4	6	L4-6-*	-1	GSGTDF

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022