PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5XXY

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	61.5	H1	13	H1-13-1	20	AASGFTFSDSWIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	70.0	H2	10	H2-10-1	10	WISPYGGSTY	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	50.0	H3	11	H3-11-*	-1	ARRHWPGGFDY	BBBBAAEEBAB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	62.5	H4	8	H4-8-1	17	ADTSKNTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	45.5	L1	11	L1-11-*	-1	RASQDVSTAVA	BBABBBBLBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	62.5	L2	8	L2-8-1	11	YSASFLYS	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	42.9	L3	9	L3-9-cis7-1	17	QQYLYHPAT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	18	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022