PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5XS7

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-12-1*01	98.6	Mo_IGHV5-12-1*01	92.3	H1	13	H1-13-1	16	AASGFAFSTYDMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-12-1*01	98.6	Mo_IGHV5-12-1*01	70.0	H2	10	H2-10-2	11	HISSGGGYIY	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-12-1*01	98.6	Mo_IGHV5-12-1*01	50.0	H3	12	H3-12-*	-1	TRQKGLYYGFDY	BBBABAABBBAB
H	heavy	Mus.musculus	Mo_IGHV5-12-1*01	98.6	Mo_IGHV5-12-1*01	100.0	H4	8	H4-8-1	12	RDNAKNTL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV6-17*01	98.6	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	17	KASQDVNTAVA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV6-17*01	98.6	Mo_IGKV6-17*01	100.0	L2	8	L2-8-*	-1	YSASYRYT	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV6-17*01	98.6	Mo_IGKV6-17*01	85.7	L3	9	L3-9-cis7-1	17	QQHYTTPHT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV6-17*01	98.6	Mo_IGKV6-17*01	100.0	L4	6	L4-6-1	16	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022